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Japan In Depth Tour

Fully Escorted

Local Cuisine

Guaranteed Departure

13 Nights

Deluxe

From US$5698.00

  • Dive deeper into Japan with a more advanced introduction to Japan’s sites.
  • Travels to Japan’s 3 main islands – Honshu, Shikoku, and Kyushu.
  • Learn how to make sushi with a professional sushi chef and watch a kimono fashion show.
  • Experience a traditional green tea ceremony hosted by an apprentice geisha (maiko).
  • Select itineraries cover the remote and beautifully preserved areas of the Japanese Alps.
  • Itineraries with Koyasan offer a chance to meet monks and stay overnight at a temple lodging.
  • Chances to see cherry blossoms, Takayama Festival, or Autumn Leaves during select tours.
  • Visit two of the twelve original castles in Japan - Matsumoto Castle and Himeji Castle.
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Japan In Depth Tour

  
26 Reviews

Tokyo - Mt Fuji - Hakone - (Takayama - Shirakawa-go - Kanazawa) - Kyoto - Nara - Osaka - (Koyasan) - Himeji - Kurashiki - Takamatsu - Shimanami Kaido - Hiroshima - Kitsuki - Beppu - Takachiho - Kumamoto - Nagasaki

13 Nights | From US$5698.00

Departure Months:

JAN FEB MAR APR MAY JUN JUL AUG SEP OCT NOV DEC

Embark on an extensive trip through three of Japan’s main islands with a combination of hidden regions and famous destinations.

For those longing to explore regions of Japan less traveled by the common tourist, while still seeing the highlights that make Japan so popular, this tour is for you! Explore the bustling city of Tokyo, the ancient city of Kyoto, and the scenic city of Takamatsu, visiting three of Japan's main islands. You will have the opportunity to immerse yourself in Japanese culture by enjoying tender wagyu beef, making rich matcha tea with a maiko (apprentice geisha), and watching a traidtional Yokag... View More

For those longing to explore regions of Japan less traveled by the common tourist, while still seeing the highlights that make Japan so popular, this tour is for you! Explore the bustling city of Tokyo, the ancient city of Kyoto, and the scenic city of Takamatsu, visiting three of Japan's main islands. You will have the opportunity to immerse yourself in Japanese culture by enjoying tender wagyu beef, making rich matcha tea with a maiko (apprentice geisha), and watching a traidtional Yokagura dance performance. Ride through Japan on our private coach bus, as your English- speaking guide provides valuable insight into the attractions. Travel along in comfort with All Japan Tours, as we explore Japan in Depth.

On this extensive tour, you will visit hand-selected attractions designed for both first-time visitors and for those wanting to see Japan's more rural gems. Three of Japan's islands, Shikoku, Kyushu, and the main island of Honshu, each offer travelers a unique experience. You will visit popular destinations on Honshu Island, such as Tokyo, Mt. Fuji, Kyoto, Osaka and Hiroshima. In the bustling city of Tokyo, experience making your own sushi lunch and take a stroll under the hundreds of cherry blossom trees during March and April. Pay a visit to Hiroshima, a city destroyed by an atomic bomb during World War II. Today, the city flourishes and offers shopping centers, beautiful gardens, the Memorial Peace Park, and the Atomic Bomb Museuem.

Travelers will also cross the Inland Sea to Shikoku Island by a scenic drive across Shimanami Kaido highway and visit Takamatsu, where you can visit one of Japan’s most beautiful landscape gardens. Take a high-speed bullet train to Kyushu to visit hidden-gems in Beppu, Takachiho, Nagasaki, and in Fukuoka. Watch 1,500 wild Japanese macaques monkeys in their natural habitat in Beppu and enjoy a trip to the mythological town of Takachiho, where you can watch as performers reenact the legend of Amaterasu, the Shinto Sun Goddess.

Travelers that select a “Japan in Depth” itinerary with Japanese Alps will experience the rural, mountainous regions of Japan, including the preserved old town of Takayama, stunning cherry blossom tree or autumn leaves in Kanazawa, and the orginal-standing castle of Matsumoto. For those passengers wanting an escape from the bustling cities, we suggest joining our "Japan in Depth" with Koyasan, a small, secluded temple town known as the center of Shingon Buddhism. Here, you will have the chance to stay overnight in a Buddhist temple, where you will gain deeper insight into a monk’s lifestyle.

Our “Japan in Depth” itinerary is perfect for those who would like a deeper understanding of a Japan that is rarely seen by the average visitor. Experience both rural areas and popular attractions in one unique Japan trip. With dates in spring and autumn, All Japan Tours selects the best dates and places to experience the cherry blossoms, autumn leaves, or even festivals.

We plan our tours based on seasonal attractions, with must see sites in every tour. Below are our Japan In Depth Tour itineraries with seasonal changes:


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10 trips through Japan

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    question mark icon         Tour#: GTU1925877

Japan In Depth with Japanese Alps Spring (Reverse) arrow readmore icon

Nagasaki / Takachiho / Beppu / Kitsuki / Hiroshima / Shimanami Kaido / Takamatsu / Kurashiki / Himeji / Kobe / Nara / Kyoto / Kanazawa / Shirakawa-go / Takayama / Matsumoto / Mt Fuji / Hakone / Tokyo

    26 reviews

14 Days 13 Nights | from US $5798.00

See what Japan has to offer with this extensive tour to the country's three main islands: Kysuhu, Honshu, and Shikoku.

Start Date End Date Twin/Triple Start City End City Style Save Status
Mon. Apr 13, 2026 Sun. Apr 26, 2026 US $5798.00 Fukuoka Tokyo Deluxe Guarantee / Book Now  
    question mark icon         Tour#: GTS1454290

Japan In Depth Autumn Tour (Reverse) with Koyasan arrow readmore icon

Nagasaki / Takachiho / Beppu / Usa / Hiroshima / Shimanamo Kaido / Takamatsu / Tokushima / Mt Koya / Osaka / Nara / Kyoto / Koka / Hakone / Mt Fuji / Tokyo

    26 reviews

14 Days 13 Nights | from US $5798.00

Exploring Japan's three main islands: Honshu, Shikoku, & Kyushu.

Start Date End Date Twin/Triple Start City End City Style Save Status
Mon. Oct 14, 2024 Sun. Oct 27, 2024 US $5798.00 Fukuoka Tokyo Deluxe Guarantee / Book Now  
Mon. Oct 20, 2025 Sun. Nov 2, 2025 US $5798.00 Fukuoka Tokyo Deluxe Guarantee / Book Now  
Mon. Oct 19, 2026 Sun. Nov 1, 2026 US $5798.00 Fukuoka Tokyo Deluxe Guarantee / Book Now  
    question mark icon         Tour#: GTY1663022

Japan In Depth: Kyoto Aoi Festival Tour arrow readmore icon

Tokyo / Mt Fuji / Hakone / Hikone / Koka / Kyoto / Nara / Osaka / Himeji / Kurashiki / Takamatsu / Shimanami Kaido / Hiroshima / Kitsuki / Beppu / Takachiho / Nagasaki

    26 reviews

14 Days 13 Nights | from US $5898.00

Observe the graceful Kyoto Aoi Festival and travel deeper into Japan by exploring the country's three main islands.

Start Date End Date Twin/Triple Start City End City Style Save Status
Mon. May 11, 2026 Sun. May 24, 2026 US $5898.00 Tokyo Fukuoka Deluxe Guarantee / Book Now  
    question mark icon         Tour#: GTK1543242

Japan In Depth with Japanese Alps: Autumn Leaves & Cherry Blossoms arrow readmore icon

Tokyo / Mt Fuji / Hakone / Obara / Takayama / Shirakawa-go / Kanazawa / Kyoto / Nara / Osaka / Himeji / Kurashiki / Takamatsu / Shimanami Kaido / Hiroshima / Kitsuki / Beppu / Takachiho / Nagasaki / Fukuoka

    26 reviews

14 Days 13 Nights | from US $5898.00

Exploring Japan's three main islands: Honshu, Shikoku, & Kyushu...plus enjoy the Obara Shikizakura Festival, where fall foliage and cherry blossoms appear at the same time.

Start Date End Date Twin/Triple Start City End City Style Save Status
Sun. Nov 10, 2024 Sat. Nov 23, 2024 US $5898.00 Tokyo Fukuoka Deluxe Guarantee / Book Now  
Sun. Nov 9, 2025 Sat. Nov 22, 2025 US $5898.00 Tokyo Fukuoka Deluxe Guarantee / Book Now  
Sun. Nov 15, 2026 Sat. Nov 28, 2026 US $5898.00 Tokyo Fukuoka Deluxe Guarantee / Book Now  
    question mark icon         Tour#: GTB1601281

Japan In Depth with Japanese Alps (Reverse): Takayama Spring Festival & Cherry Blossoms arrow readmore icon

Saga / Nagasaki / Takachiho / Beppu / Kitsuki / Hiroshima / Shimanami Kaido / Takamatsu / Kurashiki / Himeji / Kobe / Nara / Kyoto / Kanazawa / Shirakawa-go / Takayama / Mt Fuji / Hakone / Tokyo

    26 reviews

14 Days 13 Nights | from US $5998.00

Explore Japan's three main islands and experience one of Japan's most beautiful festivals: the Takayama Sanno Spring Festival.

Start Date End Date Twin/Triple Start City End City Style Save Status
Sat. Apr 5, 2025 Fri. Apr 18, 2025 US $5998.00 Fukuoka Tokyo Deluxe Guarantee / Book Now  
Sun. Apr 5, 2026 Sat. Apr 18, 2026 US $5998.00 Fukuoka Tokyo Deluxe Guarantee / Book Now  
    question mark icon         Tour#: GTY1598459

Japan In Depth with Japanese Alps (Reverse): Cherry Blossom Tour arrow readmore icon

Saga / Nagasaki / Takachiho / Beppu / Kitsuki / Hiroshima / Shimanami Kaido / Takamatsu / Kurashiki / Himeji / Kobe / Nara / Kyoto / Kanazawa / Shirakawa-go / Takayama / Matsumoto / Mt Fuji / Hakone / Tokyo

    26 reviews

14 Days 13 Nights | from US $5998.00

Travel to Japan's three main islands: Kyushu, Shikoku, & Honshu as well as the Japanese Alps during cherry blossom season.

Start Date End Date Twin/Triple Start City End City Style Save Status
Wed. Mar 26, 2025 Tue. Apr 8, 2025 US $5998.00 Fukuoka Tokyo Deluxe Guarantee / Book Now  
Wed. Mar 25, 2026 Tue. Apr 7, 2026 US $5998.00 Fukuoka Tokyo Deluxe Guarantee / Book Now  
    question mark icon         Tour#: GTH1519349

Japan In Depth with Japanese Alps (Reverse): Takayama Autumn Festival Tour arrow readmore icon

Nagasaki / Takachiho / Beppu / Kitsuki / Hiroshima / Shimanami Kaido / Takamatsu / Kurashiki / Himeji / Kobe / Osaka / Nara / Kyoto / Kanazawa / Shirakawa-go / Takayama / Mt Fuji / Hakone / Tokyo

    26 reviews

14 Days 13 Nights | from US $5998.00

Explore Japan's three main islands and experience one of Japan's most beautiful festivals: the Takayama Hachiman Autumn Festival.

Start Date End Date Twin/Triple Start City End City Style Save Status
Mon. Sep 30, 2024 Sun. Oct 13, 2024 US $5998.00 Fukuoka Tokyo Deluxe Guarantee / Book Now  
Wed. Sep 30, 2026 Tue. Oct 13, 2026 US $5998.00 Fukuoka Tokyo Deluxe Guarantee / Book Now  
    question mark icon         Tour#: GTL4825184

Japan In Depth with Japanese Alps Spring (Reverse) with Expo 2025 Osaka arrow readmore icon

Nagasaki / Takachiho / Beppu / Kitsuki / Hiroshima / Shimanami Kaido / Takamatsu / Kurashiki / Himeji / Kobe / Osaka / Nara / Kyoto / Kanazawa / Shirakawa-go / Takayama / Matsumoto / Mt Fuji / Hakone / Tokyo

    26 reviews

15 Days 14 Nights | from US $6098.00

See what Japan has to offer with this extensive tour to the country's three main islands: Kyushu, Honshu, and Shikoku, plus a visit to Expo 2025 Osaka!

Start Date End Date Twin/Triple Start City End City Style Save Status
Sun. Apr 13, 2025 Sun. Apr 27, 2025 US $6098.00 Fukuoka Tokyo Deluxe Guarantee / Book Now  
    question mark icon         Tour#: GTG4866362

Japan In Depth: Kyoto Aoi Festival Tour with Expo 2025 Osaka arrow readmore icon

Tokyo / Mt Fuji / Hakone / Hikone / Koka / Kyoto / Nara / Osaka / Himeji / Kurashiki / Takamatsu / Shimanami Kaido / Hiroshima / Kitsuki / Beppu / Takachiho / Nagasaki

    26 reviews

15 Days 14 Nights | from US $6198.00

Observe the graceful Kyoto Aoi Festival and travel deeper into Japan by exploring the country's three main islands, plus the Expo 2025 Osaka Kansai!

Start Date End Date Twin/Triple Start City End City Style Save Status
Sun. May 11, 2025 Sun. May 25, 2025 US $6198.00 Tokyo Fukuoka Deluxe Guarantee / Book Now  
    question mark icon         Tour#: GTF4982241

Japan In Depth with Japanese Alps (Reverse): Takayama Autumn Festival Tour with Expo 2025 Osaka arrow readmore icon

Nagasaki / Takachiho / Beppu / Kitsuki / Hiroshima / Shimanami Kaido / Takamatsu / Kurashiki / Himeji / Kobe / Osaka / Nara / Kyoto / Kanazawa / Shirakawa-go / Takayama / Mt Fuji / Hakone / Tokyo

    26 reviews

15 Days 14 Nights | from US $6298.00

Explore Japan's three main islands and experience one of Japan's most beautiful festivals: the Takayama Hachiman Autumn Festival and Expo 2025 Osaka Kansai.

Start Date End Date Twin/Triple Start City End City Style Save Status
Mon. Sep 29, 2025 Mon. Oct 13, 2025 US $6298.00 Fukuoka Tokyo Deluxe Guarantee / Book Now  




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Best Itinerary

Planned by experts, based on seasonal favorites and must-see sites.

Budget-friendly

Choose your style and split cost with other passengers

Hand-picked Accommodations

Chosen by our experienced staff

Fully Guided

Guide is available to you 24/7 and sleeps in the same hotel

Unique experiences

Learn to create your own Sushi, meet a geisha or maiko, and more

Connect

Meet locals and visit rural areas of Japan you might miss on other tours

What our customers say

  4.9 stars based on 539 REVIEWS